Bio x AI Hackathon
  • Welcome to the Bio x AI Hackathon
  • Getting Started
    • Quickstart
    • Important Links
  • Developers
    • BioAgents
    • CoreAgents
    • Eliza Agent Framework
    • Knowledge Graphs
    • .cursorrules
    • Starter-repos
    • Plugin Guide
  • Vision and Mission
    • Bio x AI Hackathon
    • The Problems in Science
    • TechBio
    • Guidance from the Judges
      • Important Datasets and Code Repositories
      • Reading List
      • Common Mistakes for Developers new to Academia
    • Hackathon Ideas
      • Full Projects
        • The Complexity Slider - Finding Hypotheses at the Limits of Human Knowledge
        • [Hard Mode] Metadata Generation on datasets with No Manuscript or Code Associated
        • Inverse Reproducibility - Given Manuscript and Data, Make the Code
        • Atlas of Research Methods Formatted for Agentic Reuse
        • Utilizing Knowledge Graphs for the Detection of Potential Null Results
        • Creating an Iterative Publication Stack by Linking Together Existing Tooling
      • Individual Plugins
        • Plug-ins for every piece of research tooling known to humankind
        • Reproducibility Assistant - Code Cleaning, Dockerization, etc
        • Finding and Differentiating Cardinal vs Supporting Assertions
        • [Easier Mode] Metadata Generation on Datasets Given the Manuscript and Code Repository
        • Sentiment Analysis on Existing Citations, Dissenting vs Confirming
        • Agentic Metadata Template Creation for Standard Lab Equipment
  • Ops
    • Calendar
      • Key Dates
      • Office Hours
    • Judges and Mentors
      • Communicating to Judges and Mentors
      • BioAgent Judging Panel
      • CoreAgent Judging Panel
      • Mentors
    • Prize Tracks
    • Hackathon Rules
    • Kickoff Speakers
    • FAQ
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  1. Vision and Mission

Hackathon Ideas

PreviousCommon Mistakes for Developers new to AcademiaNextFull Projects

Last updated 4 days ago

Hackathon ideas are split into two specific sections:

  • A plugin is a specific predefined task that an agent would do at any given point in time. Given a spec sheet from Thermo Fisher, return a metadata template in RDF. Clear input and output. A decent hacker should be able to make that in a weekend or so.

  • A project is an attempt to use one or more plugins to solve a more nebulous problem (ideally one which was impossible prior to AI). An example of one of these more nebulous problems would be "We dont publish null results so the literature is a minefield of dead ends. How can I find them?”

Full Projects
Individual Plugins